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OpenMS
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Splits an mzML file with IonMobility frames into multiple mzML files by binning(merging) spectra by their IM values.
Useful to convert IM data to a format that can be processed by tools that do not support IM data (e.g. FeatureFinderCentroided or SearchEngines). The results of individual bins can be processed separately and then recombined afterwards.
To decide on the number of bins, try running FileInfo on the input file to get an idea of the range of IM values present.
The command line parameters of this tool are:
INI file documentation of this tool: